2012

Liu, Z., Galli, F., Waterreus, W.J., Meulenbroek, E., Koning, R. I, Lamers, G.E., Olsthoorn, R.C., Pannu, N., Oosterkamp, T.H., Koster, A.J., Dame, R.T., Abrahams, J.P. , Single-Walled Carbon Nanotubes as Scaffolds to Concentrate DNA for the Study of DNA-Protein Interactions, Chemphyschem : a European journal of chemical physics and physical chemistry.

Nederlof, I, Van Genderen, E., Hoedemaeker, F., Abrahams, J.P., Georgieva, D. , Protein Crystal Growth, Modern Aspects of Bulk Crystal and Thin Film Preparation: InTech.

2011

Jiang, L.H., Georgieva, D., Abrahams, J.P. , EDIFF: a program for automated unit-cell determination and indexing of electron diffraction data, Journal of Applied Crystallography, vol. 44, pp. 1132-1136.

Sikharulidze, I, van Gastel, R., Schramm, S., Abrahams, J.P., Poelsema, B., Tromp, R.M., van der Molen, S.J. , Low energy electron microscopy imaging using Medipix2 detector, Nuclear Instruments & Methods in Physics Research Section a-Accelerators Spectrometers Detectors and Associated Equipment, vol. 633, pp. S239-S242.

Georgieva, D., Jansen, J., Sikharulidze, I, Jiang, L., Zandbergen, H.W., Abrahams, J.P. , Evaluation of Medipix2 detector for recording electron diffraction data in low dose conditions, Journal of Instrumentation, vol. 6.

Jiang, L.H., Georgieva, D., Nederlof, I, Liu, Z.F., Abrahams, J.P. , Image Processing and Lattice Determination for Three-Dimensional Nanocrystals, Microscopy and Microanalysis, vol. 17, no. 6, pp. 879-885.

Nederlof, I, Hosseini, R., Georgieva, D., Luo, J.H., Li, D.F., Abrahams, J.P. , A Straightforward and Robust Method for Introducing Human Hair as a Nucleant into High Throughput Crystallization Trials, Crystal Growth & Design, vol. 11, no. 4, pp. 1170-1176.

Pannu, N.S., Waterreus, W.J., Skubak, P., Sikharulidze, I, Abrahams, J.P., de Graaff, R.A.G. , Recent advances in the CRANK software suite for experimental phasing, Acta Crystallographica Section D-Biological Crystallography, vol. 67, pp. 331-337.

2010

Liu, Z.F., Jiang, L.H., Galli, F., Nederlof, I, Olsthoorn, R.C.L., Lamers, G.E.M., Oosterkamp, T.H., Abrahams, J.P. , A Graphene Oxide center dot Streptavidin Complex for Biorecognition - Towards Affinity Purification, Advanced Functional Materials, vol. 20, no. 17, pp. 2857-2865.

Jiang, L.H., Liu, Z.F., Georgieva, D., Kuil, M.E., Abrahams, J.P. , A novel approximation method of CTF amplitude correction for 3D single particle reconstruction, Ultramicroscopy, vol. 110, no. 4, pp. 350-358.

Liu, Z., Galli, F., Janssen, K., Jiang, ., Linhua,, van der Linden, H.J., de Geus, D., Voskamp, P., Kuil, M., Olsthoorn, R., Oosterkamp, T., Hankemeier, T., Abrahams, J.P. , Stable Single Walled Carbon Nanotube•Streptavidin Complex for Bio–Recognition, The Journal of Physical Chemistry .

Abrahams, J.P. , The Strong Phase Object Approximation May Allow Extending Crystallographic Phases of Dynamical Electron Diffraction Patterns of 3D Protein Nano-Crystals, Zeitschrift für Kristallographie, vol. 225, issue 2-3: Oldenbourg Wissenschaftsverlag , pp. 67-76.

2009

van Haren, J., Draegestein, K., Keijzer, N., Abrahams, J.P., Grosveld, F., Peeters, P.J., Moechars, D., Galjart, N. , Mammalian Navigators are Microtubule Plus-End Tracking Proteins that can Reorganize the Cytoskeleton to Induce Neurite-Like Extensions, Cell Motility and the Cytoskeleton, vol. 66, no. 10, pp. 824-838.

Meulenbroek, E.M., Paspaleva, K., Thomassen, E.A.J., Abrahams, J.P., Goosen, N., Pannu, N.S. , Involvement of a carboxylated lysine in UV damage endonuclease, Protein Science, vol. 18, no. 3, pp. 549-558.

Jiang, L.H., Georgieva, D., Zandbergen, H.W., Abrahams, J.P. , Unit-cell determination from randomly oriented electron-diffraction patterns, Acta Crystallographica Section D-Biological Crystallography, vol. 65, issue 7, pp. 625-632.

Pannu, N.S., Ravelli, R.B.G., Abrahams, P. , The Max-Inf2/Lorentz Center workshop on New algorithms in macromolecular crystallography and electron microscopy, Acta Crystallographica Section D-Biological Crystallography, vol. 65, pp. 623-624.

van Gastel, R., Sikharulidze, I, Schramm, S., Abrahams, J.P., Poelsema, B., Tromp, R.M., van der Molen, S.J. , Medipix 2 detector applied to low energy electron microscopy, Ultramicroscopy, vol. 110, no. 1, pp. 33-35.

de Geus, D.C., van Roon, A.M.M., Thomassen, E.A.J., Hokke, C.H., Deelder, A.M., Abrahams, J.P. , Characterization of a diagnostic Fab fragment binding trimeric Lewis X, Proteins-Structure Function and Bioinformatics, vol. 76, no. 2, pp. 439-447.

de Geus, D.C., Thomassen, E.A.J., Hagedoorn, P.L, Pannu, N.S., van Duijn, E., Abrahams, J.P. , Crystal Structure of Chlorite Dismutase, a Detoxifying Enzyme Producing Molecular Oxygen, J. Mol. Biol. .

Jiang, L., Georgieva, D., IJspeert, K., Abrahams, J.P , An Intelligent Peak Search Program for Digital Electron Diffraction Images of 3D Nano-Crystals, Image and Signal Processing, 2009. CISP '09. 2nd International Congress on17-19 Oct. 2009, vol. 17-19 Oct., pp. 1-5.

Jiang, L.H., Schaffitzel, C., Bingel-Erlenmeyer, R., Ban, N., Korber, P., Koning, R. I, de Geus, D.C., Plaisier, J.R., Abrahams, J.P. , Recycling of Aborted Ribosomal 50S Subunit-Nascent Chain-tRNA Complexes by the Heat Shock Protein Hsp15, Journal of Molecular Biology, vol. 386, no. 5, pp. 1357-1367.

2008

Zovko, S., Abrahams, J.P., Koster, A.J., Galjart, N., Mommaas, A.M. , Microtubule plus-end conformations and dynamics in the periphery of interphase mouse fibroblasts, Molecular Biology of the Cell, vol. 19, no. 7, pp. 3138-3146.

de Geus, D.C., Thomassen, E.A.J., van der Feltz, C.L., Abrahams, J.P. , Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of chlorite dismutase: a detoxifying enzyme producing molecular oxygen, Acta Crystallographica Section F-Structural Biology and Crystallization Communications, vol. 64, pp. 730-732.

2007

Paspaleva, K., Thomassen, E., Pannu, N.S., Lwai, S., Moolenaar, G.F., Goosen, N., Abrahams, J.P. , Crystal structure of the DNA repair enzyme ultraviolet damage endonuclease, Structure, vol. 15, no. 10, pp. 1316-1324.

Georgieva, D.G., Kuil, M.E., Oosterkamp, T.H., Zandbergen, H.W., Abrahams, J.P. , Heterogeneous nucleation of three-dimensional protein nanocrystals, Acta Crystallographica Section D-Biological Crystallography, vol. 63, pp. 564-570.

Jan Pieter Abrahams teaches or supervises the following courses:

• Moleculaire biologie (MST1161)
• Analysis of the 3D structure of proteins by diffraction and imaging methods

Jan Pieter currently supervises the following students:

• Eric van Genderen
• Jinghui Luo
• Igor Nederlof